PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0096s0026.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 220aa MW: 25255 Da PI: 6.8705

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0096s0026.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.7e-17	18	64	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +W eEd++l ++v ++G ++W+ Ia++ g++R++k+c++rw++yl Kaladp0096s0026.2.p 18 AAWKLEEDQKLEEYVLKHGAKRWNQIAEKTGLNRSGKSCRLRWLNYL 64 58*******************************************97 PP
2	Myb_DNA-binding	49.7	8.6e-16	70	114	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++++E++l+ +++k+lG++ W++Ia +++ gRt++++k++w+ + Kaladp0096s0026.2.p 70 RGNMSEDEEDLIQRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNFH 114 899*****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MAAGKTRGSS YKEVTSRAAW KLEEDQKLEE YVLKHGAKRW NQIAEKTGLN RSGKSCRLRW 60 LNYLKPGIKR GNMSEDEEDL IQRLHKLLGN RWSLIAGRLP GRTDNEIKNY WNFHLKTRVL 120 GETETNNIPS KHKTSRTSYY EKEPTTSGNN NHECHAGNPN ANQIDNECQA AGNLNANQIN 180 EADNCFDWSP HISDCSEWVN RLLDLDVEQW LQEDMDILN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27920.1	4e-48	MYB family protein