PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0096s0026.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 198aa    MW: 22949.5 Da    PI: 7.063
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0096s0026.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.97.2e-164892147
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                         rg+++++E++l+ +++k+lG++ W++Ia +++ gRt++++k++w+ +
  Kaladp0096s0026.3.p 48 RGNMSEDEEDLIQRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNFH 92
                         89********************.*********.***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MEIRRRSETG RICSKTRCQE MESNCRKNRS GKSCRLRWLN YLKPGIKRGN MSEDEEDLIQ  60
RLHKLLGNRW SLIAGRLPGR TDNEIKNYWN FHLKTRVLGE TETNNIPSKH KTSRTSYYEK  120
EPTTSGNNNH ECHAGNPNAN QIDNECQAAG NLNANQINEA DNCFDWSPHI SDCSEWVNRL  180
LDLDVEQWLQ EDMDILN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.15e-36MYB family protein