PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0096s0027.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 110aa    MW: 12752.7 Da    PI: 9.9532
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0096s0027.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.61.8e-1558102248
                          SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          g++++eE++l+ +++k+lG+  W++Ia +++ gRt++++k++w+ +l
  Kaladp0096s0027.1.p  58 GNMSEEEEDLIQRLHKLLGNI-WSLIAGRLP-GRTDNEIKNYWNLHL 102
                          789****************99.*********.***********9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
MAHFHFVRRH GQQPVVTFYI PWCFFCNADG APFAGLNRSG KSCRLRWLNY LKPDIKSGNM  60
SEEEEDLIQR LHKLLGNIWS LIAGRLPGRT DNEIKNYWNL HLKKRVLGD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.15e-37MYB family protein