PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0096s0123.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family E2F/DP
Protein Properties Length: 380aa    MW: 41937.7 Da    PI: 4.5573
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0096s0123.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP86.61.8e-2742107171
              E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                          r+++sL+llt+kf++l++++e+gi++ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+irwkg
  Kaladp0096s0123.1.p  42 RYDSSLGLLTKKFINLIKHAEDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIRWKG 107
                          6899******************************...99..****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    
MSAKGGRVYN KSKGSKGNKA AAQTPMLTAG SPSALTPAGN CRYDSSLGLL TKKFINLIKH  60
AEDGILDLNK AAETLEVQKR RIYDITNVLE GIGLIEKKLK NRIRWKGLDV SQPGGVETDV  120
FSLQTDVENL TLEEQKLDGE IREMQERLRY LSEDENNQKW LFVTEDDIKS LPCFQNETLI  180
AIKAPHGTTL EVPDPDEAAD YPQRRYRIVL RSTMGPIDVY LVSQFEEKFE DMNGAEQSVN  240
CPVASTSRSV ENSGTHATNT ESMGNDITGQ AQDARRLPSD HQMNDNGSDD FVSGIMKIVP  300
DVNTDTDYWF LSDAELSVTE LWHSESGIGN HLEDMHHANY EIGDTSIPQP QTPPSGVTDI  360
PPPSVNSTPR LVCSPKTIE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.11e-135E2F/DP family protein