PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0096s0157.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 248aa    MW: 27069.3 Da    PI: 8.8355
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0096s0157.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260128.33.5e-40401411101
               DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89 
                          +C aCk+lrrkCa++Cv+apyf ++q +++fa+vhk+FGasnv+kll+++p ++r+d++ +++yeA+ar++dPvyG+v++il+lqqq++ 
  Kaladp0096s0157.1.p  40 PCGACKFLRRKCAAGCVFAPYFGSDQgAARFAAVHKVFGASNVSKLLQHIPVNRRQDTVVTVTYEAQARLSDPVYGCVSTILALQQQVAA 129
                          7***********************9989************************************************************** PP

               DUF260  90 lkaelallkeel 101
                          l++el++++++l
  Kaladp0096s0157.1.p 130 LQTELSMVQSQL 141
                          *******99985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MADPPGGRGR ETMSHRKGQS KRPDDEATGR IPAATPTTPP CGACKFLRRK CAAGCVFAPY  60
FGSDQGAARF AAVHKVFGAS NVSKLLQHIP VNRRQDTVVT VTYEAQARLS DPVYGCVSTI  120
LALQQQVAAL QTELSMVQSQ LINRKLAATN SLQTSQQQQL LGPQQQMSSM SSVMMQPAYS  180
NNSSSSNNNN DNNTLMNHLA SFNSNFGAAT CFQPLRLSRH QLQNEDDDEE KSPDAIIFTN  240
DIFHRRH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03760.15e-53LBD family protein