PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0098s0053.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HD-ZIP

Protein Properties

Length: 182aa MW: 21480.3 Da PI: 6.9697

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0098s0053.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.3	6.3e-19	98	151	4	57
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++++eql++Le+ F+++ +++ e++ +LA++lg++ rq+ vWFqNrRa++k+ Kaladp0098s0053.1.p 98 KKRLNDEQLDALERNFREEIKLDPERKMRLARELGMQPRQIAVWFQNRRARWKN 151 45699***********************************************95 PP
2	HD-ZIP_I/II	112.1	3.7e-36	97	179	2	84
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekev 84 kk+rl++eq+ +LE++F+ee kL+perK++lareLg+qprq+avWFqnrRAR+k+kqlE+ y+aLk+++d +++e+ rL++ev Kaladp0098s0053.1.p 97 KKKRLNDEQLDALERNFREEIKLDPERKMRLARELGMQPRQIAVWFQNRRARWKNKQLERMYDALKQEFDVVSREKLRLQEEV 179 9*******************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence
MEPWSNGGSN SIIRPPFLAA RPENNPLNFL YYYNYDDQHQ GCLEQVEAHP GMMMMEPVSP 60 HHVLTSHHSM ENANNPHDDL MMSAKSGHSY GNVQDLKKKR LNDEQLDALE RNFREEIKLD 120 PERKMRLARE LGMQPRQIAV WFQNRRARWK NKQLERMYDA LKQEFDVVSR EKLRLQEEVT 180 F*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	145	153	RRARWKNKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	1e-38	HD-ZIP family protein