PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0098s0063.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

GRF

Protein Properties

Length: 382aa MW: 41922.1 Da PI: 9.8811

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0098s0063.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	69.9	3.1e-22	152	193	1	42
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrks 42 d+epgrCrRtDGKkWRCsr+v +g+k+C+rH++rgr+++++ Kaladp0098s0063.1.p 152 DPEPGRCRRTDGKKWRCSRDVAPGHKYCDRHMNRGRMNRSRN 193 79*********************************9877654 PP
2	QLQ	49.9	9.8e-18	78	112	3	37
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 F+ aQ+q+L+ Q+ +++y++a++ vP+eLlq+i++ Kaladp0098s0063.1.p 78 FSSAQWQELELQAVIFRYMLAGASVPAELLQPIKN 112 9********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MDFKLMQWRD QQQQREHQSN HQAVGKDRKQ DQQQEQQSLS ALSLFLTEPV SKVGIMSGLL 60 DTPSASKFPK MMMMGGQFSS AQWQELELQA VIFRYMLAGA SVPAELLQPI KNSLLNSSSF 120 FLHHPLQHYS NYQPAATVAL LQSGYWGRAG MDPEPGRCRR TDGKKWRCSR DVAPGHKYCD 180 RHMNRGRMNR SRNRSRKPVE LPKPRTNMTP TNYVNAGGGE LGNSVYPMKA PPLGVPSRAH 240 FGSIGGAAAA APSIDSLHLG RRSPFELDRT ESPHSGTSDC RVLRRFFDDW PRPMAESGAG 300 GTHIDLMGSS ASLSMSTQEN SASDVSLKLS TGSGSEEASA ERDRTQLNWM AQWGQHQAGP 360 MGGPLAEALR SSATPAAELA R*

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MDFKLMQWRD QQQQREHQSN HQAVGKDRKQ DQQQEQQSLS ALSLFLTEPV SKVGIMSGLL  60
DTPSASKFPK MMMMGGQFSS AQWQELELQA VIFRYMLAGA SVPAELLQPI KNSLLNSSSF  120
FLHHPLQHYS NYQPAATVAL LQSGYWGRAG MDPEPGRCRR TDGKKWRCSR DVAPGHKYCD  180
RHMNRGRMNR SRNRSRKPVE LPKPRTNMTP TNYVNAGGGE LGNSVYPMKA PPLGVPSRAH  240
FGSIGGAAAA APSIDSLHLG RRSPFELDRT ESPHSGTSDC RVLRRFFDDW PRPMAESGAG  300
GTHIDLMGSS ASLSMSTQEN SASDVSLKLS TGSGSEEASA ERDRTQLNWM AQWGQHQAGP  360
MGGPLAEALR SSATPAAELA R*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	6e-54	GRF family protein