PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0098s0133.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YC
Protein Properties Length: 257aa    MW: 28527.6 Da    PI: 6.0197
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0098s0133.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC174.31.3e-54761791101
                NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd 87 
                          ql++fw++q   iek+tdfknh+lPlarikki+kadedv+misaeaP+++++ace+fileltlr+w+h+eenkrrtl+k+diaaav+rtd
  Kaladp0098s0133.1.p  76 QLQAFWSNQkleIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPIIFARACEMFILELTLRAWNHTEENKRRTLQKNDIAAAVNRTD 165
                          89******9999****************************************************************************** PP

                NF-YC  88 ifdflvdivprdel 101
                          ifdflvdi p+++l
  Kaladp0098s0133.1.p 166 IFDFLVDILPKEDL 179
                          ***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MDQQSLGQSH MTASGVAAAP VAYVTPPYQH NQLTGPANPG PIFAPAPVYS QAAGQLAPHI  60
AFQQINQQQQ QQLQQQLQAF WSNQKLEIEK VTDFKNHSLP LARIKKIMKA DEDVRMISAE  120
APIIFARACE MFILELTLRA WNHTEENKRR TLQKNDIAAA VNRTDIFDFL VDILPKEDLK  180
DEALASIPRG PLPAGGPDML PPYHYMPPQN MPHLGAPGMI MGEPVMDPSL YAHQPHPYMA  240
PQMWPQAPQQ DQSSSE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149155RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.32e-77NF-YC family protein