PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0099s0035.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 107aa    MW: 11681.7 Da    PI: 4.4751
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0099s0035.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.45.8e-121464147
                         TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47
                         r  WT eEd l+ da++++ +     +W+ + r+mg  +t +++++++q +
  Kaladp0099s0035.1.p 14 RTTWTREEDVLFEDAFALYHNQdpstRWENVVRHMGGSKTVEEVIHHYQLL 64
                         678*********************************99**********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    
MAGSTNSNSS SPSRTTWTRE EDVLFEDAFA LYHNQDPSTR WENVVRHMGG SKTVEEVIHH  60
YQLLVEDVNN IEAGRIALPA YGDGDTAEAL GGGGGLGYNL SYFFFH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.23e-16MYB_related family protein