PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0099s0038.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 109aa    MW: 12137 Da    PI: 4.2156
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0099s0038.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.41.1e-101765347
                         SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding  3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47
                          WT eEd+++ +a +++       +W+ + r mg+ +t +++++++q +
  Kaladp0099s0038.1.p 17 TWTREEDKRFEEALALYIDQdpstRWDNVVRQMGESKTVEEVIHHYQLL 65
                         7****************988**************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
MSSSNNSNSA TPSRTTTWTR EEDKRFEEAL ALYIDQDPST RWDNVVRQMG ESKTVEEVIH  60
HYQLLVDDVN NIEAGRISLP DYVDDDTDEA LSTSSPPSNS NDKCRGGK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.25e-19MYB_related family protein