PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0099s0085.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family AP2
Protein Properties Length: 397aa    MW: 43274.8 Da    PI: 8.5786
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0099s0085.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.13.8e-17143192155
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                          s y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  Kaladp0099s0085.2.p 143 SPYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 192
                          68*******************......55************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MFDLNIHYSH HHQSPHPSST DSAATSSSSV IVNSTSAGDE DSASINNHTS APPSTLFFDI  60
LNRDHENPVP VAGAGLVART LFPSAVESSS SPAVVPQWLN LSFADSASSH SELCSLQQPN  120
HHNLQQLKPV GKKSRRGPRS RSSPYRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA  180
RAYDRAAIKF RGVDADINFD LKDYDNDMKQ MAELSKEEFV HVLRRQSTGF ARSSSKYKGV  240
TLHKYGRPDH AGLGQALAQS FYPVVFDREA AFARYNEGEA VTNTEANTYP RGYLTLNPIN  300
KGSDGTLDLS LGITPTSNNS CPTGTNITAI PGLPAYARHG RDRDMFNASA VRVLCGQPSS  360
HGFTNPSPTV WQFQQHPSNP AHMPQIKVTS TSASYP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.31e-58AP2 family protein