PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0099s0120.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 206aa    MW: 22526.2 Da    PI: 8.9067
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0099s0120.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox51.81.4e-1648102256
                          T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          rk+ +++k+    Lee ++++++++ +++  LAkkl+L  rqV vWFqNrRa+ k
  Kaladp0099s0120.1.p  48 RKKMRLSKDLSAFLEESYKEHNTLNPKQKLALAKKLHLRPRQVEVWFQNRRARTK 102
                          5677888999999****************************************98 PP
2HD-ZIP_I/II117.76.6e-3848137191
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          +kk rlsk+ +++LEes++e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+L+r++++l+een rL+ke ++Lr +
  Kaladp0099s0120.1.p  48 RKKMRLSKDLSAFLEESYKEHNTLNPKQKLALAKKLHLRPRQVEVWFQNRRARTKLKQTEVDCEYLRRRCETLTEENGRLQKELQDLR-A 136
                          69*************************************************************************************9.5 PP

          HD-ZIP_I/II  91 l 91 
                          l
  Kaladp0099s0120.1.p 137 L 137
                          5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MELGLSLGST TANQSSNSNA IVSHSAAEEG DNIGSNRGEE GGQDFGCRKK MRLSKDLSAF  60
LEESYKEHNT LNPKQKLALA KKLHLRPRQV EVWFQNRRAR TKLKQTEVDC EYLRRRCETL  120
TEENGRLQKE LQDLRALKSS NPLLCLQSPA TTLTMCPSCE ATNATTTDTK SSKAVASFPV  180
VTKSGPASCT FPRSNADPDA SSSSR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197105RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.16e-52HD-ZIP family protein