PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0100s0035.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 238aa    MW: 27526.3 Da    PI: 9.7057
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0100s0035.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.61.6e-28959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         krien++nrqvt+skRrng++KKAeEL vLCda+v++i++sst+k++ey+s
  Kaladp0100s0035.1.p  9 KRIENTTNRQVTYSKRRNGLFKKAEELTVLCDAKVSIIMISSTQKIHEYIS 59
                         79***********************************************86 PP
2K-box90.62.9e-3071168198
                K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqee 90 
                          yqk+s+++++++++e++++ l+k+k+ ++ L++e+R+++Ge+L++Ls++eL+ Leq+++++++ iR++K++ + + +++l+kk ++++e+
  Kaladp0100s0035.1.p  71 YQKASNTDVWSKQYERMEETLRKVKEMNKRLRTEIRQRMGECLNDLSFEELRGLEQDMDNAVTAIRARKYKAIGSRTDTLRKKVRNVEEI 160
                          8999************************************************************************************** PP

                K-box  91 nkaLrkkl 98 
                           ++L+++l
  Kaladp0100s0035.1.p 161 YRKLNQEL 168
                          ****9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MARGKIQIKR IENTTNRQVT YSKRRNGLFK KAEELTVLCD AKVSIIMISS TQKIHEYISP  60
GITTKQVVDL YQKASNTDVW SKQYERMEET LRKVKEMNKR LRTEIRQRMG ECLNDLSFEE  120
LRGLEQDMDN AVTAIRARKY KAIGSRTDTL RKKVRNVEEI YRKLNQELVS PQPHFEYNRE  180
AREEDRHYGL VDNNNSGDYE SVIALGPRVF ALHLNPNQSA NMQTCAGGSD LTYTLMN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.17e-86MIKC_MADS family protein