PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0100s0035.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 227aa    MW: 26170.8 Da    PI: 9.7423
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0100s0035.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.71.5e-28959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         krien++nrqvt+skRrng++KKAeEL vLCda+v++i++sst+k++ey+s
  Kaladp0100s0035.2.p  9 KRIENTTNRQVTYSKRRNGLFKKAEELTVLCDAKVSIIMISSTQKIHEYIS 59
                         79***********************************************86 PP
2K-box91.11.9e-3071169199
                K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqee 90 
                          yqk+s+++++++++e++++ l+k+k+ ++ L++e+R+++Ge+L++Ls++eL+ Leq+++++++ iR++K++ + + +++l+kk ++++e+
  Kaladp0100s0035.2.p  71 YQKASNTDVWSKQYERMEETLRKVKEMNKRLRTEIRQRMGECLNDLSFEELRGLEQDMDNAVTAIRARKYKAIGSRTDTLRKKVRNVEEI 160
                          8999************************************************************************************** PP

                K-box  91 nkaLrkkle 99 
                           ++L+++le
  Kaladp0100s0035.2.p 161 YRKLNQELE 169
                          ******987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MARGKIQIKR IENTTNRQVT YSKRRNGLFK KAEELTVLCD AKVSIIMISS TQKIHEYISP  60
GITTKQVVDL YQKASNTDVW SKQYERMEET LRKVKEMNKR LRTEIRQRMG ECLNDLSFEE  120
LRGLEQDMDN AVTAIRARKY KAIGSRTDTL RKKVRNVEEI YRKLNQELEA REEDRHYGLV  180
DNNNSGDYES VIALGPRVFA LHLNPNQSAN MQTCAGGSDL TYTLMN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.11e-89MIKC_MADS family protein