PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0100s0036.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

SRS

Protein Properties

Length: 355aa MW: 38849.8 Da PI: 8.0323

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0100s0036.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	193.1	9.4e-60	133	285	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstkls 92 g+++CqdCGnqakkdC h RCRtCCksrg++C+th+kstWvpa+krrerqqqlaa++++++ + ++++ kr + l++t+ Kaladp0100s0036.1.p 133 GGGINCQDCGNQAKKDCPHLRCRTCCKSRGLQCQTHIKSTWVPASKRRERQQQLAALQQSQQLRLRSQDITLKRP-----RGELTTTN-- 215 5789**************************************************9877766554444333332.....23333333.. PP DUF702 93 saeskkeletsslPeevsseavfrcvrvssvd.....dg.....eeelaYqtavsigGhvfkGiLydqGlee 154 ++s l +++P+ev+s+a+frcvrvss+d d+ e++laYqtavsigGhvfkGiLydqG+e+ Kaladp0100s0036.1.p 216 -TTSGLDL-SNTFPNEVNSQAIFRCVRVSSMDpehnaDEehgrhEDQLAYQTAVSIGGHVFKGILYDQGPES 285 .3333333.345***************8444331122333578*********************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MASFFSSLGG GGSGGVRDEQ DEEQDQQQPP PAAANSLFLY RSEEIYKQQQ GLEIWQQQQF 60 YRQQQQQQQQ YQPRDQHHHH HHIISYAPAA APPPSLMAPS SSRRLSFNVS SDASSSRSGG 120 GGFTVMRGIG GSGGGINCQD CGNQAKKDCP HLRCRTCCKS RGLQCQTHIK STWVPASKRR 180 ERQQQLAALQ QSQQLRLRSQ DITLKRPRGE LTTTNTTSGL DLSNTFPNEV NSQAIFRCVR 240 VSSMDPEHNA DEEHGRHEDQ LAYQTAVSIG GHVFKGILYD QGPESRYGES SSVGSGAYQQ 300 QQQQLNLITS GATTTGAMTT SIAATQALLD ASLNYPTPIN AFMAGTQFFP PSRS*

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MASFFSSLGG GGSGGVRDEQ DEEQDQQQPP PAAANSLFLY RSEEIYKQQQ GLEIWQQQQF  60
YRQQQQQQQQ YQPRDQHHHH HHIISYAPAA APPPSLMAPS SSRRLSFNVS SDASSSRSGG  120
GGFTVMRGIG GSGGGINCQD CGNQAKKDCP HLRCRTCCKS RGLQCQTHIK STWVPASKRR  180
ERQQQLAALQ QSQQLRLRSQ DITLKRPRGE LTTTNTTSGL DLSNTFPNEV NSQAIFRCVR  240
VSSMDPEHNA DEEHGRHEDQ LAYQTAVSIG GHVFKGILYD QGPESRYGES SSVGSGAYQQ  300
QQQQLNLITS GATTTGAMTT SIAATQALLD ASLNYPTPIN AFMAGTQFFP PSRS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66350.1	3e-53	SRS family protein