PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0100s0079.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

LBD

Protein Properties

Length: 226aa MW: 24599.4 Da PI: 5.151

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0100s0079.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	115.7	3e-36	9	109	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89 +C aCk+lrrkC+++Cv+apyf ++ + +f +vhk+FGasnv+kll ++p ++r++a+ ++ yeA r+ dPv G+v++i +l+qq+++ Kaladp0100s0079.1.p 9 SCGACKFLRRKCTSECVFAPYFSYDEaATHFGAVHKVFGASNVSKLLMHIPVQHRTEAALTISYEAFSRMTDPVFGCVAHIYALHQQIAN 98 6********************988689********************************************************* PP DUF260 90 lkaelallkee 100 l++e++l++++ Kaladp0100s0079.1.p 99 LQEEIELVGSQ 109 ****99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MPGQGSSSSC GACKFLRRKC TSECVFAPYF SYDEAATHFG AVHKVFGASN VSKLLMHIPV 60 QHRTEAALTI SYEAFSRMTD PVFGCVAHIY ALHQQIANLQ EEIELVGSQM AAGFPFTFPV 120 SQPTADKVSM NPAAFNLQQQ MDHHQQAQYI TNAGYGNSAA DQSYIYQCQQ LPFVWGSGEA 180 HSGNIDNYLN GEINEGLDHE PLLCSPLLNN NDNVTEIPNT AASGW*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06080.1	1e-55	LBD family protein