PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0100s0110.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YA
Protein Properties Length: 321aa    MW: 34794.9 Da    PI: 9.7542
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0100s0110.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA95.18.2e-30155211158
            CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                          d p+YVNaKQy++I++RR  Rak+e  kk  +++rkpy+heSRh hA+rRpRg+gGrF
  Kaladp0100s0110.1.p 155 DGPIYVNAKQYHGIIRRRLYRAKAELVKKS-IRARKPYMHESRHLHAMRRPRGCGGRF 211
                          57************************9999.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MQTVYLKEYE GMSENTIGHL TSGQRMPWWA ADSHSDPTDA FRHLKALPAE HAAAGSQFTL  60
TKSDPSEVVK GAGKGGSTQF TISTGGERNQ HVRASVTVQP TLPDYQSHLE SGFGQAMVYS  120
KYPYGDQSYS VMSTYGPQVA VQGRVMLPLD MTSDDGPIYV NAKQYHGIIR RRLYRAKAEL  180
VKKSIRARKP YMHESRHLHA MRRPRGCGGR FLNTKISDAG MGGNSMKSTS NGLLTQPTGS  240
PSSGIFQSDS GTLNSPKQSN SDMSHISGSE ATSMYTRGDL RRFTTNFLSH SLPAVMDTGH  300
GIGAPSHWVA AAQNCCNLNA *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.21e-54NF-YA family protein