PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0100s0111.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 119aa    MW: 13593.7 Da    PI: 7.9811
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0100s0111.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF25.22.1e-08639942
                         HHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
               SRF-TF  9 rqvtfskRrngilKKAeELSvLCdaevaviifss 42
                         r+  f kRr+ ++ KA  +S+L++ e++ +++s+
  Kaladp0100s0111.1.p  6 RKAIFRKRRECLMRKATQISTLTGEEACGVVLSP 39
                         677799**********************999996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
MHPQLRKAIF RKRRECLMRK ATQISTLTGE EACGVVLSPP VYWPPSINGV LDRFLSLHEA  60
DQCKKMTTPD SFMQEKIAKM EEEVNKEHRK ATDQEINYVT HSIYSHGKPI DCLTFGET*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65300.14e-14M-type_MADS family protein