PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0100s0112.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 281aa    MW: 31555.2 Da    PI: 5.6982
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0100s0112.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF30.44.9e-101150342
                         --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
               SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                         i n + r  tf kRr+ ++ K +E+SvL +++++ ii+s+
  Kaladp0100s0112.1.p 11 ITNPTARRATFRKRRENLIRKLNEISVLAGTDACGIILSP 50
                         88999********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MTRKKVQLAW ITNPTARRAT FRKRRENLIR KLNEISVLAG TDACGIILSP FEGDPPVFWP  60
PSINDILGRF FSLPELEQYK RMVSIESYMR DEISKLKETI QKERREVKEA EVSYIMNSIH  120
SHGMPIETLG GDETSELFWY FEELKKKCDL RLNQLDPNAS APQPLPESQM GMLNNTDLTD  180
PWLNRNCNNV TNNMQANYDY ATQNNNNNNN GFGTFGGGNN IGMAGPDSSN PPYSQPPFES  240
HHGFFSNSGM AGPSSNNASY PQPPPPFGSH KGFYSEDTGY *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVQLAWITNPTARRATFRKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05860.22e-27M-type_MADS family protein