PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0101s0013.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 541aa MW: 60771.6 Da PI: 4.5507

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0101s0013.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.4	9.9e-52	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 l+pGfrFhPtdeelv +yL++k+ g+ +++ ++i+++d+yk+ePw+Lp k k+k+++ ewyfFs d+ky++g+++nrat++gyWk+tgk Kaladp0101s0013.1.p 9 LAPGFRFHPTDEELVRYYLRRKICGRGFRF-DAIASTDVYKSEPWELPgKsKLKSRDLEWYFFSMLDRKYSNGSKTNRATENGYWKTTGK 97 579************************9.99***********6347777888**************************** PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 d++vl+ k+++vg+kktLv+++grap+g +++Wvmheyrl Kaladp0101s0013.1.p 98 DRPVLH-KSKTVGMKKTLVYHHGRAPHGARSNWVMHEYRL 136 **.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MGRKPAASLA PGFRFHPTDE ELVRYYLRRK ICGRGFRFDA IASTDVYKSE PWELPGKSKL 60 KSRDLEWYFF SMLDRKYSNG SKTNRATENG YWKTTGKDRP VLHKSKTVGM KKTLVYHHGR 120 APHGARSNWV MHEYRLIDED LEKAGVLQDA FVLCRIFQKS GSGPKNGEQY GAPFEEEEWD 180 DDVVTTVPGE QLTNEVVVCD NPYSEADDVY IDADELEQNN SDISPAAPPA FNYYDDSGSC 240 LFDDDQKPFI GTRENYESNI VDGESCFDVL NVLDPYEGED KPVKEEHFAV SGETPLDASY 300 LLEEPYLNAN QEPLLHEGLF LETNDLLNQV EPDPSNFDML EEYLNYFESS DTLTQTESQV 360 VADESLPASK QVDREIERLV LKSQLHPDAQ GSDVASSSNQ CPEDTKFDSG FKHQFVNMLG 420 KKQSPYSFST KDASLRLASS SQSPSSIHVT AGMVQIRNMD AFGNRLSWTF NKNGNIEVVL 480 SLALPRRDAD TSSLDILADK LSGKASSAMF RAWFYLIVFW VLIIAISFKI ASLVSTKGSC 540 *

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MGRKPAASLA PGFRFHPTDE ELVRYYLRRK ICGRGFRFDA IASTDVYKSE PWELPGKSKL  60
KSRDLEWYFF SMLDRKYSNG SKTNRATENG YWKTTGKDRP VLHKSKTVGM KKTLVYHHGR  120
APHGARSNWV MHEYRLIDED LEKAGVLQDA FVLCRIFQKS GSGPKNGEQY GAPFEEEEWD  180
DDVVTTVPGE QLTNEVVVCD NPYSEADDVY IDADELEQNN SDISPAAPPA FNYYDDSGSC  240
LFDDDQKPFI GTRENYESNI VDGESCFDVL NVLDPYEGED KPVKEEHFAV SGETPLDASY  300
LLEEPYLNAN QEPLLHEGLF LETNDLLNQV EPDPSNFDML EEYLNYFESS DTLTQTESQV  360
VADESLPASK QVDREIERLV LKSQLHPDAQ GSDVASSSNQ CPEDTKFDSG FKHQFVNMLG  420
KKQSPYSFST KDASLRLASS SQSPSSIHVT AGMVQIRNMD AFGNRLSWTF NKNGNIEVVL  480
SLALPRRDAD TSSLDILADK LSGKASSAMF RAWFYLIVFW VLIIAISFKI ASLVSTKGSC  540
*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-134	NAC family protein