PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0101s0126.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 363aa MW: 41943.5 Da PI: 6.5096

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0101s0126.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.8	4.2e-53	8	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatg 87 +ppGfrFhPtdeelv++yL+k+v++ +++l +vik+vd+y++ePwdL++ ++ ++++ ++yfFs++dkky+tg+r+nratk+g+Wkatg Kaladp0101s0126.1.p 8 VPPGFRFHPTDEELVDYYLRKRVASMQIDL-DVIKDVDLYRIEPWDLQElcNIGSDDQsDYYFFSHKDKKYPTGTRTNRATKAGFWKATG 96 69**************************.9***********95445555444488************************* PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +dk++++ k++ vg++ktLvfykgrap+g+k dW+mheyrle Kaladp0101s0126.1.p 97 RDKAIYA-KHSMVGMRKTLVFYKGRAPNGQKLDWIMHEYRLE 137 ***.8889**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MNSFSNVVPP GFRFHPTDEE LVDYYLRKRV ASMQIDLDVI KDVDLYRIEP WDLQELCNIG 60 SDDQSDYYFF SHKDKKYPTG TRTNRATKAG FWKATGRDKA IYAKHSMVGM RKTLVFYKGR 120 APNGQKLDWI MHEYRLETNE NAAHQEEGWV VCRVFKKRMM TTSMRKDGDH HHESPYWYDE 180 QASFMGDMDS PMRMLSSHPY PSHNHLYHPP SYSCKQEQQL DLHNYTLSQD SFLNLPQLES 240 PKIPTPASAN ITSYGFGDQG VQHSYQNNVM YGDNSNSFAN EHHQAVDQVS TDWRVLDKFV 300 ASQLSHENGV EKHYYLNNGS TFEMDQDDMS GLIDNNGSKR VKMRTEFASS STSSGQVDQW 360 KS*

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MNSFSNVVPP GFRFHPTDEE LVDYYLRKRV ASMQIDLDVI KDVDLYRIEP WDLQELCNIG  60
SDDQSDYYFF SHKDKKYPTG TRTNRATKAG FWKATGRDKA IYAKHSMVGM RKTLVFYKGR  120
APNGQKLDWI MHEYRLETNE NAAHQEEGWV VCRVFKKRMM TTSMRKDGDH HHESPYWYDE  180
QASFMGDMDS PMRMLSSHPY PSHNHLYHPP SYSCKQEQQL DLHNYTLSQD SFLNLPQLES  240
PKIPTPASAN ITSYGFGDQG VQHSYQNNVM YGDNSNSFAN EHHQAVDQVS TDWRVLDKFV  300
ASQLSHENGV EKHYYLNNGS TFEMDQDDMS GLIDNNGSKR VKMRTEFASS STSSGQVDQW  360
KS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-129	NAC family protein