PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0101s0194.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 250aa    MW: 29102.4 Da    PI: 8.6479
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0101s0194.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.31.4e-1832118799
                          .-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                   B3   7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                          + ++++++ l++pkkf  ++ +k   + t++l+ ++g  W+vk+   k+ + ++l+kGW +Fv ++ L+e D +vF+++g+s+f   v++
  Kaladp0101s0194.1.p  32 QIMANSNSELRVPKKFGMKFPMK--LGETIKLRGPTGDIWRVKV--VKTEEDVLLRKGWPRFVYDHLLNEYDLLVFRYTGSSSF--DVSI 115
                          556788899********999877..7779***************..**********************************9999..9999 PP

                          E-S CS
                   B3  97 frk 99 
                          f++
  Kaladp0101s0194.1.p 116 FDR 118
                          998 PP
2B354.22.6e-17138226198
                          EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                          ffkv+  +  ++s+ l +pkk   ++g +++ + t++l+ +sg +W+v    ++ ++ ++l+ GW +Fv+++ L+e Df++F+++g+s+f
  Kaladp0101s0194.1.p 138 FFKVM--NQEFRSK-LLIPKKL--RIGFVEKMGNTIRLKGPSGYVWKVGA--ERAGEDIILGIGWTQFVSDHTLDESDFLIFHYTGDSSF 220
                          78888..7777776.999***8..5777777888****************..**********************************9999 PP

                          ..EEEEE- CS
                   B3  91 elvvkvfr 98 
                             v +f+
  Kaladp0101s0194.1.p 221 --SVLIFD 226
                          ..888887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MAEMDEREET SRAMEEQIYW NQFESTKHHF FQIMANSNSE LRVPKKFGMK FPMKLGETIK  60
LRGPTGDIWR VKVVKTEEDV LLRKGWPRFV YDHLLNEYDL LVFRYTGSSS FDVSIFDRNA  120
CVKDLRMLQD RFESKPHFFK VMNQEFRSKL LIPKKLRIGF VEKMGNTIRL KGPSGYVWKV  180
GAERAGEDII LGIGWTQFVS DHTLDESDFL IFHYTGDSSF SVLIFDLSKC EKESSHFVKP  240
AARSTDLRG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-19B3 family protein