PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0102s0006.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 192aa    MW: 21111.6 Da    PI: 8.138
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0102s0006.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.000213456123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         + C++C++ F++   L  H++ H
  Kaladp0102s0006.1.p 34 FGCTYCKRGFTNAQALGGHMNIH 56
                         56*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MAETGKQLRC SGSPIDESDL AKEEGAAETG RRSFGCTYCK RGFTNAQALG GHMNIHRKDR  60
AKAKQRGTAA KKANCYADES NYMMSYRQIA PMSSCTTDIG YAQREQTQRM VSSRHHMYCP  120
ATVPSVFNQI PVGGNPDPIR PGLHFLGPPH LSLRVGSAAS NRVAWNKNSE DDHEEDNNIE  180
DVDLELRLGP R*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.13e-14C2H2 family protein