PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0102s0049.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 248aa    MW: 28585.9 Da    PI: 9.5018
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0102s0049.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.21.9e-182067148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT+eEd+ll + v+q+G g+W++++r  g++R +k+c++rw +yl
  Kaladp0102s0049.1.p 20 KGPWTAEEDKLLTEHVTQHGEGRWNSVSRLTGLKRNGKSCRLRWVNYL 67
                         79******************************9*************97 PP
2Myb_DNA-binding51.91.7e-1673117147
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          rg  T+ E+ +++++++++G++ W+tIar ++ gRt++++k++w+++
  Kaladp0102s0049.1.p  73 RGQITPHEETIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 117
                          7888******************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MVWGGVMAAA WGYADEGWRK GPWTAEEDKL LTEHVTQHGE GRWNSVSRLT GLKRNGKSCR  60
LRWVNYLRPD LKRGQITPHE ETIILELHAR WGNRWSTIAR SLPGRTDNEI KNYWRTHFKK  120
KGTKAASHSA EKAKTRLLRR QQFQQQQQIQ QQQQQQQQYQ QQQQIFSQVE TKASTNGCAE  180
KTAPYPYWPQ QMLNLPDSTY LNVNSDQGFF YAMLNDNSNV DGLVPEPAAN NESAALWDGL  240
WNLDDVV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24310.11e-75MYB family protein