PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0102s0124.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C3H
Protein Properties Length: 367aa    MW: 40869.4 Da    PI: 7.0231
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0102s0124.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.89.2e-09131151526
                          --SGGGGTS--TTTTT-SS-SS CS
              zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                           C+ f++ G C++Gd C FaHg
  Kaladp0102s0124.1.p 131 ACPEFRK-GSCRRGDACEFAHG 151
                          7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MMIGEPPRSH PTIQIPPNWD PYEDPTADIN SPLQVNGGPF GSPDFTNPFS LPDSFGSLQR  60
YLPSNEPDMF DDEFADLPLD AFSCDNFRMY DFKVRRCARG RSHDWTECPF AHPGEKARRR  120
DPRKYSYSGT ACPEFRKGSC RRGDACEFAH GVFECWLHPD RYRTQACKDG LYCRRRICFF  180
AHSQDQLRVI NTPSPRKSLI SSNSADSYDG SPLRRSFDSF NANTASFCST SPPTSPPSSP  240
PLSTLLCSSY GSVNELVSNM RGLQLAKAAP SPTSTWATIG SPRGSSNLRP GFFSLPTTPT  300
RVPARSGRAQ FEQWDSSEEP VMERVESGRD LRAKIYAKLS KDNSFGPVND SQLTDPDVAW  360
ISDLVQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-111C3H family protein