PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0102s0125.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 284aa    MW: 30734.7 Da    PI: 7.2079
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0102s0125.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.25.2e-151462148
                         TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                         rg+W +eEde+l  +++++G+g +W + +++ g++R++k+c++rw++yl
  Kaladp0102s0125.1.p 14 RGPWCPEEDEILRSYIELHGTGgNWIALPSKAGLKRCGKSCRLRWLNYL 62
                         89*********************************************97 PP
2Myb_DNA-binding42.91.1e-1369111246
                          SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                          g++T+eEd  +  +  ++G++ W+ Ia+++  gRt++++k++w++
  Kaladp0102s0125.1.p  69 GAFTEEEDRVIFSLYSEMGSR-WSVIAARLH-GRTDNDVKNHWNT 111
                          89*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MGRAPCCDKA KVKRGPWCPE EDEILRSYIE LHGTGGNWIA LPSKAGLKRC GKSCRLRWLN  60
YLRPDIKHGA FTEEEDRVIF SLYSEMGSRW SVIAARLHGR TDNDVKNHWN TKLKKLMVMK  120
DQREAYAAAH SSSVSSHRES YSFVKFPNMK AKTHQESASA VPNLQPGVFG YGGSSLAFAH  180
CDPVGLTAPT GLMAMPACYA SKAESDLSGG SSSVNNGEGF LIDMLNYGEG VGDGCHELLQ  240
SAVLGSSDQK CSGTEDLAGN GAVPTFSAML SEYMYQGGLV DQY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.17e-68MYB family protein