PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0102s0139.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 253aa    MW: 27535.4 Da    PI: 9.7331
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0102s0139.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.85.7e-14102145447
                          S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          WT++E+ +++ + ++lG+g+W+ I++++   Rt+ q+ s+ qky
  Kaladp0102s0139.1.p 102 WTEDEHRKFLAGLEKLGKGDWRGISKHFVPSRTPTQVASHAQKY 145
                          *****************************9*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MAKACSYCGS MGHNSRTCVT YNKNTLVAPR LKLFGVQLDA PIASSSTMKK SCSVGCFSPS  60
VSLSSCTLPN ASLPRNSSIL PTGYLSDDHN GHPKTRKKGV LWTEDEHRKF LAGLEKLGKG  120
DWRGISKHFV PSRTPTQVAS HAQKYFLRQH NLSKKRKGPS LCSPQTEDFS KTVWLKYASS  180
YYSEAFCGRS SYLPSPMTNL LVANWLYNSS GLSTYPKCKH LSKPATVEAE PNLDLTIAAP  240
PQSESTCGCL GT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.11e-39MYB_related family protein