PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0160s0001.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HSF
Protein Properties Length: 167aa    MW: 18367.7 Da    PI: 8.0665
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0160s0001.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind117.58.1e-37381302103
                          HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS
         HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 
                          Fl k+y++++d++++ ++sws+ +nsfvv+++ ef +++LpkyFkhsnf+SFvRQLn+YgF+kv+ ++         weF+++ F +gkk
  Kaladp0160s0001.1.p  38 FLCKTYDMVDDPSTDAVVSWSSGNNSFVVWNPPEFGRDLLPKYFKHSNFSSFVRQLNTYGFRKVHPDR---------WEFANEGFLRGKK 118
                          9****************************************************************999.........************* PP

                          XXXXXXXXXXXX CS
         HSF_DNA-bind  92 ellekikrkkse 103
                          +ll++ikr+k +
  Kaladp0160s0001.1.p 119 HLLNTIKRRKAS 130
                          *********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MSNGADGGIS GTCRAESTQS VPAPVPVPMP NPNAPPPFLC KTYDMVDDPS TDAVVSWSSG  60
NNSFVVWNPP EFGRDLLPKY FKHSNFSSFV RQLNTYGFRK VHPDRWEFAN EGFLRGKKHL  120
LNTIKRRKAS QAPTQPQLEQ SQVQSPAATA CVEVGKFGLE EEVEKI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.18e-64HSF family protein