PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0177s0003.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 270aa    MW: 30713.8 Da    PI: 9.2173
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0177s0003.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox521.2e-16105159256
                          T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          rk+ +++keq   Le+ F+ + ++ ++++e LA++l+L  rqV vWFqNrRa+ k
  Kaladp0177s0003.1.p 105 RKKLRLNKEQSALLEDSFKLQTTLHQKQKEALARQLNLLPRQVEVWFQNRRARTK 159
                          5777899**********************************************98 PP
2HD-ZIP_I/II111.75e-36105194190
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          +kk+rl+keq++lLE+sF+ +++L++++K++lar+L+l prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++enerL+ke ++L+++
  Kaladp0177s0003.1.p 105 RKKLRLNKEQSALLEDSFKLQTTLHQKQKEALARQLNLLPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCERLTNENERLRKELRALKQA 194
                          69*************************************************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MSPPPPPPPL DGRGLLLGLA LRTAPVPPLG LSLSSTHDHH IISYDHQPSL TLSLLFPANK  60
LDDYDDDQIS SLSNSVNSVK RERAYGVANN NINDAYEDVS NNIIRKKLRL NKEQSALLED  120
SFKLQTTLHQ KQKEALARQL NLLPRQVEVW FQNRRARTKL KQTEVDCEFL KRCCERLTNE  180
NERLRKELRA LKQASQHQPF HKHLPTARLS MCPSCHSFTD LRNNPATASN NDISHPNFLT  240
SSEKHILFND PFVTKPTEQL KPYHSFSVM*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1154162RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.11e-60HD-ZIP family protein