PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0192s0039.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 372aa MW: 40941.2 Da PI: 8.4545

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0192s0039.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.3	1e-55	49	177	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lppGfrFhPtdeel+++yL kkv ++++++ ++i+evd++k+ePw+Lp+k++ +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+ Kaladp0192s0039.1.p 49 LPPGFRFHPTDEELITYYLIKKVLDSNFTA-RAIAEVDLNKCEPWELPEKARMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDR 137 79***********************999.89***********99999********************************* PP NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129 e++s+ + +lvg+kktLvfy+grapkgek++Wvmheyrle Kaladp0192s0039.1.p 138 EICSSkTLSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 177 9745567***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MMDMMMMMKM MGYSSNQNNY HQHTHGDSNS TACTMVGADI ISSSSSATLP PGFRFHPTDE 60 ELITYYLIKK VLDSNFTARA IAEVDLNKCE PWELPEKARM GEKEWYFFSL RDRKYPTGLR 120 TNRATEAGYW KATGKDREIC SSKTLSLVGM KKTLVFYRGR APKGEKSNWV MHEYRLEGKF 180 AYHFLSRSSK DEWVISRVFQ KTGVGLVSTS TTSTTGNKQK PPNRHHQEVS SASSASLPPL 240 LNPDISSGES FAAKTAAAAQ QQHVSCFSTM AAHPAASYIS SDFPPAAVEG GAAAASASAY 300 NCVFPSLRSL QENLNFPNFF FPAPSSCVHG GIGEMMEISG GGSWQQQLLG EKRKIVGGTE 360 LDCLWTSNYS Q*

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MMDMMMMMKM MGYSSNQNNY HQHTHGDSNS TACTMVGADI ISSSSSATLP PGFRFHPTDE  60
ELITYYLIKK VLDSNFTARA IAEVDLNKCE PWELPEKARM GEKEWYFFSL RDRKYPTGLR  120
TNRATEAGYW KATGKDREIC SSKTLSLVGM KKTLVFYRGR APKGEKSNWV MHEYRLEGKF  180
AYHFLSRSSK DEWVISRVFQ KTGVGLVSTS TTSTTGNKQK PPNRHHQEVS SASSASLPPL  240
LNPDISSGES FAAKTAAAAQ QQHVSCFSTM AAHPAASYIS SDFPPAAVEG GAAAASASAY  300
NCVFPSLRSL QENLNFPNFF FPAPSSCVHG GIGEMMEISG GGSWQQQLLG EKRKIVGGTE  360
LDCLWTSNYS Q*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	1e-100	NAC family protein