PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0208s0002.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 780aa    MW: 85221.6 Da    PI: 6.4838
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0208s0002.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS417.31.3e-1274097682374
                 GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                           +lLl+cAeavs+++le+a+++L ++s+l++p g++ qR+aayf eA+++rl++s+ ++y++lp++  ++++++ + +a+++f+ +sP++
  Kaladp0208s0002.1.p 409 LTLLLQCAEAVSADNLEEANQMLLEISQLSTPFGTSAQRVAAYFSEAMSSRLVSSCLGIYRSLPATVLPHYTHKMVSSAFQVFNGISPFV 498
                          579*************************************************************************************** PP

                 GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl 181
                          kfsh+taNqaI ea+e+e+rvHiiD+di+qGlQWp L++ LasRp+gpp +R+Tg+g     s e+le+tg+rL++fA++lg+pfef + 
  Kaladp0208s0002.1.p 499 KFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGT----SMEALEATGKRLSDFADKLGLPFEFFP- 583
                          **********************************************************....***************************. PP

                 GRAS 182 vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
                          va+++ +l+le+L+++++Ea+aV++    h+l+d ++s ++    +L+l+++l Pkvv+vveq+++h ++sFl rf+ea++yysalfdsl
  Kaladp0208s0002.1.p 584 VAEKIGNLDLEKLNISRREAVAVHWLQ--HSLYDVTGSDTN----TLWLLQRLAPKVVTVVEQDLSH-AGSFLGRFVEAIHYYSALFDSL 666
                          7*************************9..999999999999....**********************.899******************* PP

                 GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlg 361
                           a++ +eseer++vE++ll+rei+nv+a  g +r  + + +++Wre+++e+GF+ ++l  +aa+qa lll +++ dgy++ e+sg+l lg
  Kaladp0208s0002.1.p 667 GASYDEESEERHVVEQQLLSREIRNVLAVGGPSRSGEVK-FQNWREKFQESGFRGISLAGNAATQATLLLGMFPCDGYTLVEDSGTLKLG 755
                          *********************************888776.************************************************** PP

                 GRAS 362 WkdrpLvsvSaWr 374
                          Wkd  L+++SaWr
  Kaladp0208s0002.1.p 756 WKDLCLLTASAWR 768
                          ************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 780 aa     Download sequence    
MSATTCSDPS NSAPVTDDIV SSSAANNQPH PKMLRKRTAS DLNSSSNTLY HQQHRFPRRI  60
SQDHAGNDSG VAPDRNPSFD SVLDCSGFQR PPAAAAAAAA IATTTLVPNN NHSTSLSVTL  120
PMTSTLTSLT QLAPPPDASS SSSLSHHHLL PPPPSALPAV CNFSGLPLFP PQHHHYHHLQ  180
RPIPPAPDSS MDDSRSSTAW IDGIIKDLIH SSSASVSIPQ LIHNVREIIF PCNPTLAAQL  240
EHRLRFLTES AASRLPEMPV RKDAVAVQSP LLPPPPRQQY QHHQQQHHLL LDGSAHHLPY  300
DTVIVPSQIT AAHSQPSNWG AAALPAPPPP PHQQSCNDQN TVTNLPNPRQ QSEQSDERET  360
SSPSDPAGSV VTPSPTETAP SPTAALASYK QMKEEARQRQ RDEEGLHLLT LLLQCAEAVS  420
ADNLEEANQM LLEISQLSTP FGTSAQRVAA YFSEAMSSRL VSSCLGIYRS LPATVLPHYT  480
HKMVSSAFQV FNGISPFVKF SHFTANQAIQ EAFEREDRVH IIDLDIMQGL QWPGLFHILA  540
SRPGGPPFVR LTGLGTSMEA LEATGKRLSD FADKLGLPFE FFPVAEKIGN LDLEKLNISR  600
REAVAVHWLQ HSLYDVTGSD TNTLWLLQRL APKVVTVVEQ DLSHAGSFLG RFVEAIHYYS  660
ALFDSLGASY DEESEERHVV EQQLLSREIR NVLAVGGPSR SGEVKFQNWR EKFQESGFRG  720
ISLAGNAATQ ATLLLGMFPC DGYTLVEDSG TLKLGWKDLC LLTASAWRPY QPNPHYYVH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein