PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0210s0002.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 502aa MW: 55998.9 Da PI: 4.7471

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0210s0002.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.5	6.7e-15	308	350	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + Er RRd++N+++ +L++l+P++ kK + a+i+e A+eYIk+L Kaladp0210s0002.3.p 308 ATERDRRDNLNNKYTTLKSLIPSP-----KKTDRASIVEDAIEYIKEL 350 78********************.....9**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MYEETACFDP NPIADEGAIQ VISNDLASIP PHGNMESSIA IPHFDFDENV KFPVDEFFYK 60 SSSKEDSMVA PTNVVASSAV GTEFQQQMAY DVENCYYGTE SDSRMQEAIH EVNQALSYEQ 120 SNWVASGDYE VQDMCYSSEN QQQMLQDELV HNGQGIYTSS SVLDVPHPSA PDLLHLLHLP 180 RSPSSASFLP NSTISFVNAS QSSTNFQNGA GLMDAASSSA MFYDPLLHLN LPPQPPIFKD 240 LFQSLPHGFN LPVPMTGSLF ARMDEMERSR GLYHDVDGHL IDDGVLEFTA DMPPQMVKGR 300 NGKLKPFATE RDRRDNLNNK YTTLKSLIPS PKKTDRASIV EDAIEYIKEL TRTINELKVL 360 VEKKRRVKER MKMLKTEASP DPESSSDVKH NSELNEPLRS SWLQRKSKDT EVDVRIIDDE 420 LTVKLSQRKK ANCLLTMSKI LEELQLDLQH VSGGQVGDFY SFVCNTKIGE TSCVYAGGIA 480 KRLIEGVERQ QAGLGTNKIS F*

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MYEETACFDP NPIADEGAIQ VISNDLASIP PHGNMESSIA IPHFDFDENV KFPVDEFFYK  60
SSSKEDSMVA PTNVVASSAV GTEFQQQMAY DVENCYYGTE SDSRMQEAIH EVNQALSYEQ  120
SNWVASGDYE VQDMCYSSEN QQQMLQDELV HNGQGIYTSS SVLDVPHPSA PDLLHLLHLP  180
RSPSSASFLP NSTISFVNAS QSSTNFQNGA GLMDAASSSA MFYDPLLHLN LPPQPPIFKD  240
LFQSLPHGFN LPVPMTGSLF ARMDEMERSR GLYHDVDGHL IDDGVLEFTA DMPPQMVKGR  300
NGKLKPFATE RDRRDNLNNK YTTLKSLIPS PKKTDRASIV EDAIEYIKEL TRTINELKVL  360
VEKKRRVKER MKMLKTEASP DPESSSDVKH NSELNEPLRS SWLQRKSKDT EVDVRIIDDE  420
LTVKLSQRKK ANCLLTMSKI LEELQLDLQH VSGGQVGDFY SFVCNTKIGE TSCVYAGGIA  480
KRLIEGVERQ QAGLGTNKIS F*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	363	368	KKRRVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	5e-54	bHLH family protein