PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0262s0019.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB_related

Protein Properties

Length: 428aa MW: 46035.1 Da PI: 9.7302

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0262s0019.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51	3.4e-16	61	105	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a k++G W+ I +++g ++t+ q++s+ qk+ Kaladp0262s0019.1.p 61 REKWTEEEHQKFIEALKLYGRA-WRQIEEYIG-TKTAVQIRSHAQKF 105 789***************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MQVDPAMAPL QIPTAGSKSP GTSIASGNNS QNILNANCET DLDGSGVALK VRKPYTISKQ 60 REKWTEEEHQ KFIEALKLYG RAWRQIEEYI GTKTAVQIRS HAQKFFSKVT KESASSGEAP 120 TEAIDIPPPR PKRKPLHPYP RKFVEAPNKT RQGPSLKENG SSTISKNLET GALSPTSVLS 180 PEVAHISTSH AKAQGSGSVS ATSSGSHSSS VLEKSNPIKN NSTPIKEKDL LRTLNLSGPS 240 SHDSTSVQTR KKFKDIELTK DEGVYSEAET KFFGGVSPLK AIKLFGQTVV VTKPLDLSLG 300 MKNVVMPTAT RGPLMCCVSH MDSLVGSQPY DSSPDGQLVT GGILMGERSR EKGGSKGFSV 360 NGLISDAISK AYNEETNQDS VDSKIRSSEG PILSPSEGRK GFVPYKRCVS EREAVLQMNK 420 ADCRVCL*

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MQVDPAMAPL QIPTAGSKSP GTSIASGNNS QNILNANCET DLDGSGVALK VRKPYTISKQ  60
REKWTEEEHQ KFIEALKLYG RAWRQIEEYI GTKTAVQIRS HAQKFFSKVT KESASSGEAP  120
TEAIDIPPPR PKRKPLHPYP RKFVEAPNKT RQGPSLKENG SSTISKNLET GALSPTSVLS  180
PEVAHISTSH AKAQGSGSVS ATSSGSHSSS VLEKSNPIKN NSTPIKEKDL LRTLNLSGPS  240
SHDSTSVQTR KKFKDIELTK DEGVYSEAET KFFGGVSPLK AIKLFGQTVV VTKPLDLSLG  300
MKNVVMPTAT RGPLMCCVSH MDSLVGSQPY DSSPDGQLVT GGILMGERSR EKGGSKGFSV  360
NGLISDAISK AYNEETNQDS VDSKIRSSEG PILSPSEGRK GFVPYKRCVS EREAVLQMNK  420
ADCRVCL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46830.1	3e-35	MYB_related family protein