PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0266s0005.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 273aa    MW: 30596.8 Da    PI: 10.5322
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0266s0005.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.41.4e-1756101148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg+W++eEd++l ++vk+ G ++W++  + m+  Rt+k+c++rw+++l
  Kaladp0266s0005.1.p  56 RGPWSPEEDDQLRKLVKKNGRRNWSKLGSFMN--RTGKSCRLRWHNHL 101
                          89*****************************7..************97 PP
2Myb_DNA-binding49.31.1e-15112154347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          + T++Ed+ +v  +k+ G++ W++Ia++++ gRt++q+k+rw++ 
  Kaladp0266s0005.1.p 112 PITPQEDKVIVTMHKRVGNR-WSLIAQKLP-GRTDNQVKNRWNST 154
                          67******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MAPYFWLANR NGEEKENEKE KDRILGDRWW WPGDDISAVE GEISENGEEG GDKLRRGPWS  60
PEEDDQLRKL VKKNGRRNWS KLGSFMNRTG KSCRLRWHNH LKPGVVPVTL GPITPQEDKV  120
IVTMHKRVGN RWSLIAQKLP GRTDNQVKNR WNSTLRRRRQ HALNQQQQRK ATGRATAPWA  180
NRVKPGPDLG GGCGSLAGPG RVSGPERLQY FGCIEGARSL MHPVSPPEPE VRPFPCMAPP  240
APASEPSSVI AQLKGVVEGI CQEELKLRNS ML*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50060.16e-32MYB family protein