PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0278s0025.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 577aa    MW: 64822 Da    PI: 8.0532
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0278s0025.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.61.4e-202378156
                         TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                         +++ +++t++q+++Lee+F+++++p+ ++r++L++ l+L  rq+k+WFqNrR++ k
  Kaladp0278s0025.2.p 23 KKHYHRHTAHQIQRLEEAFKECPHPDDKQRQQLSRDLELAPRQIKFWFQNRRTQLK 78
                         688999**********************************************9877 PP
2START154.31e-482244472206
                          HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....E CS
                START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....k 78 
                          +a  aa+e+ ++ + +ep+Wvks+    + +n d + + f ++++     +++e +r+sgvv m++  lv  +++++  W e ++    +
  Kaladp0278s0025.2.p 224 IAANAAEEVHRLLQTDEPLWVKSAtdgrQVLNLDMYHKMFRRANNhmnpnSRVESSRDSGVVLMNSIALVGMFMNSN-TWMELFPtivsA 312
                          577899999*****************9999999999999999888999*****************************.99999999999* PP

                          EEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCE CS
                START  79 aetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksngh 161
                          a t++v+s+g      gal+lm ae q+lsplvp R+f f+Ry++q ++g w+i+dvS d + + +  ss   +++lpSg+li++ +ng 
  Kaladp0278s0025.2.p 313 ARTIQVLSPGllgnqnGALHLMHAEVQVLSPLVPtREFFFLRYCQQVQQGLWIIADVSCDFPCNHQ-FSSRHLSHRLPSGCLIQDIPNGF 401
                          **************************************************************9998.6788889**************** PP

                          EEEEEEE-EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
                START 162 skvtwvehvdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                          skv+wve+v+  +r+p h l+  l++sg a+ga +w atlqr ce+
  Kaladp0278s0025.2.p 402 SKVIWVERVEIHDRSPpHLLYTDLINSGFAFGAERWIATLQRVCER 447
                          ****************9***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 577 aa     Download sequence    
MEDFGLGGPE QAADPNQEEK MKKKHYHRHT AHQIQRLEEA FKECPHPDDK QRQQLSRDLE  60
LAPRQIKFWF QNRRTQLKGQ LERAGNCVLR AENDKIRCEN IAMREALRNI ICPNCGAPPD  120
LQEDSFFDER KLRLDNAQLK EELDRVSSIA ANYIGRPVTQ LPPVQPINIS SLDLSMGSFG  180
GKGMHGPSLN LDLPAGSTSS ALNNLQLQPV LALSDTQKSI MTTIAANAAE EVHRLLQTDE  240
PLWVKSATDG RQVLNLDMYH KMFRRANNHM NPNSRVESSR DSGVVLMNSI ALVGMFMNSN  300
TWMELFPTIV SAARTIQVLS PGLLGNQNGA LHLMHAEVQV LSPLVPTREF FFLRYCQQVQ  360
QGLWIIADVS CDFPCNHQFS SRHLSHRLPS GCLIQDIPNG FSKVIWVERV EIHDRSPPHL  420
LYTDLINSGF AFGAERWIAT LQRVCERFSF FLDTLTREPG GANLIPDGRK SMMKLGQRMI  480
TNFCATVSTA NAHPCITVAG FSESGIRVAV RKSTNAGKPS SDVVLGAATT IWLPVSPQTI  540
FDFFKDEQKR AQASLLWIFL YNATTNHSIN YYFINK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein