PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0279s0002.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 260aa    MW: 28436.5 Da    PI: 6.1376
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0279s0002.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.8e-19121170255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                          gy+GVr+++ +g+W+AeIrdp     +   r++lg+f  ae+Aa+a+++a+ k++g
  Kaladp0279s0002.1.p 121 GYRGVRQRP-WGKWAAEIRDP-----HraVRVWLGTFNNAEDAARAYDRAAFKFRG 170
                          8********.**********7.....338*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
METSFTAGQS PSFRLTSDQE VAAMVAALTT VVTGGGSHQP LPHAATTSYS HDSESASSVW  60
SIESESDTCR FCQLRDCLGC NLFAPNLEAR EPLKGGKNRA AAATGAKKMK KRSDQSGMMR  120
GYRGVRQRPW GKWAAEIRDP HRAVRVWLGT FNNAEDAARA YDRAAFKFRG PRAKLNFPFE  180
DYSSAAEQSS PDSAPQAYQC EPSDRTTDQS LDFDLAGGFG APGMWDFRGN DEVMRQWMMS  240
METGTGEYSD SASVIFQSF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.19e-30ERF family protein