PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0323s0002.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 227aa    MW: 25846.7 Da    PI: 4.4865
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0323s0002.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.53e-203184356
                         --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                         k++++ ++q+++Le+ Fe +++++ e++ +LA +lgL+ rqV +WFqNrRa++k
  Kaladp0323s0002.1.p 31 KKRRLRADQVKALERSFEAESKLDPERKVQLAIELGLDPRQVAIWFQNRRARWK 84
                         4567899**********************************************9 PP
2HD-ZIP_I/II126.41.2e-4031121292
          HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                          kkrrl ++qvk+LE+sFe+e+kL+perKv+la eLgl+prqva+WFqnrRAR+ktkqlE+d+++L++ayd lk++ +++++++e+L +++
  Kaladp0323s0002.1.p  31 KKRRLRADQVKALERSFEAESKLDPERKVQLAIELGLDPRQVAIWFQNRRARWKTKQLEHDFNSLQSAYDDLKQNYDAVKRDNENLIKQI 120
                          9*************************************************************************************9998 PP

          HD-ZIP_I/II  92 k 92 
                           
  Kaladp0323s0002.1.p 121 G 121
                          5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MKKSGSKREL DSDVAFEEEE ECVEGSGQPD KKRRLRADQV KALERSFEAE SKLDPERKVQ  60
LAIELGLDPR QVAIWFQNRR ARWKTKQLEH DFNSLQSAYD DLKQNYDAVK RDNENLIKQI  120
GEMKQKMIKR ENGLSDKKEM TVCEGRFDLS FNYETTFYSN VNVVSSDSAT SGVQSEENSA  180
QNGVVSSCGF PGSEEDAVMW PAATYSFLVD EDAPPMFDWC CPDPWN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17987RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G40060.11e-42HD-ZIP family protein