PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0381s0002.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 294aa    MW: 32251 Da    PI: 6.7055
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0381s0002.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding582.2e-181461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT+ Ed++lv++v+ +G g W+ I++  g++R++k+c++rw++yl
  Kaladp0381s0002.1.p 14 KGAWTAMEDQKLVEYVEAHGEGKWRNIPKGAGLKRCGKSCRLRWLNYL 61
                         79********************************************97 PP
2Myb_DNA-binding51.62.2e-1667111147
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          rg+ +++E++l+++++k+lG++ W++Ia +++ gRt++++k++w++ 
  Kaladp0381s0002.1.p  67 RGNISPDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111
                          7899******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MGRNPCCAKE GLNKGAWTAM EDQKLVEYVE AHGEGKWRNI PKGAGLKRCG KSCRLRWLNY  60
LRPDIKRGNI SPDEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLSKKLGSSN  120
MNNNMKKMQQ KHQQPTFLIT QSSQVGQAPD EEESSLVQTA PEDQILNSSR VMNANCSPNI  180
IVSGSNEDSW SLDHDGELEM DFDIRDLIDF AEFGNASVRG DKTYCGNNNI AGATLGSSSN  240
GEQDNSCLVI PEHILALPGH KCHQSHVASD GSASSSPISY TLKGYQAFAA SSA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16720.13e-60MYB family protein