PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0401s0003.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family TALE
Protein Properties Length: 143aa    MW: 17040.2 Da    PI: 9.012
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0401s0003.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox23.78.1e-08801241354
                          HHHHHHHH...HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
             Homeobox  13 eeLeelFe...knrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                           +L++  +   k +yp+++++++L +++gL+ +q+ +WF N+R +
  Kaladp0401s0003.1.p  80 SVLKNWWQqhsKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 124
                          55666666222469*****************************87 PP
2ELK26.91.1e-094566122
                  ELK  1 ELKhqLlrKYsgyLgsLkqEFs 22
                         ELK +L++++++++ ++++E++
  Kaladp0401s0003.1.p 45 ELKIELKQGFKSRIEDVREEIL 66
                         9*******************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MSDEEDEDED LELHHHHHHS SNDMIMGFGL PTESERTLME RVRQELKIEL KQGFKSRIED  60
VREEILRKRR AGKLPSDTTS VLKNWWQQHS KWPYPTEDDK AKLVEETGLQ LKQINNWFIN  120
QRKRNWHVAS QSVTSLKSKR KR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122142RKRNWHVASQSVTSLKSKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62990.19e-75TALE family protein