PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0403s0001.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 239aa    MW: 26767.3 Da    PI: 5.4014
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0403s0001.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.21.5e-16105155255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                          +y+GVr+++ +g+++AeIrdp     k  r++lg+f++  +Aaka++ a+ k++g
  Kaladp0403s0001.1.p 105 HYRGVRRRP-WGKFAAEIRDP---ArKGSRVWLGTFDSDVDAAKAYDFAAFKMRG 155
                          8********.**********8...4445**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MDETSTLDLI RSHLLADFAS TESFISSLHS DLLLDSTPST TTSPYDAPFW SLFPVKREMT  60
DTDHNYNLLE FIKPEFFDIA TSQREDTGKT SSSEETSSPP FDRKHYRGVR RRPWGKFAAE  120
IRDPARKGSR VWLGTFDSDV DAAKAYDFAA FKMRGSKAIL NFPLQAGKEA GPPENSGRRR  180
RRRRDSRAET TATESAAGSS SSCFNNNDDD NNNEPWTPSS HNLTFTTTTT TEDQMLLV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1178183RRRRRR
2178184RRRRRRR
3178185RRRRRRRD
4179184RRRRRR
5179185RRRRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.11e-28ERF family protein