PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0418s0006.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 294aa    MW: 32877.6 Da    PI: 8.3914
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0418s0006.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.18.5e-20141195256
                          T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          rk+ +++k+q  +Le+ F+++++++ +++  LAk+lgLt rqV vWFqNrRa+ k
  Kaladp0418s0006.1.p 141 RKKLRLSKDQSAILEDKFKEHNTLNPKQKMALAKQLGLTPRQVEVWFQNRRARTK 195
                          788899***********************************************98 PP
2HD-ZIP_I/II128.92e-41141230191
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          +kk+rlsk+q+++LE++F+e+++L+p++K++la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +
  Kaladp0418s0006.1.p 141 RKKLRLSKDQSAILEDKFKEHNTLNPKQKMALAKQLGLTPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR-A 229
                          69*************************************************************************************9.5 PP

          HD-ZIP_I/II  91 l 91 
                          l
  Kaladp0418s0006.1.p 230 L 230
                          5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MMVDQEADLG LSLSLNLTHN TQKQQHQNQL SSQKQAHQFH NVNLFHSFFN SAVQHRASWN  60
PFSSDQTPIM RSGETRTSPK GIDVNRLPSS EDYTEDAGAS SPNSAISSLS GKRSERDENN  120
ADHLDRAACS GSDEEDGDNS RKKLRLSKDQ SAILEDKFKE HNTLNPKQKM ALAKQLGLTP  180
RQVEVWFQNR RARTKLKQTE VDCEFLKRCC ENLTEENRRL QKEVQELRAL KLSPQLYMPM  240
APPTTLTICP SCELVGAPRA EGRSQSHQAG VGLSNNNPWA GAGRPFDAIR PRS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1140146SRKKLRL
2190198RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16780.13e-93HD-ZIP family protein