PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0418s0009.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 155aa MW: 17676.9 Da PI: 10.7362

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0418s0009.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.5e-16	10	58	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l +++ ++Gg+ +W++++ ++g+ R +k+c++rw +yl Kaladp0418s0009.1.p 10 RGLWSPEEDEKLRNYILRHGGHgSWSSVPVEIGLQRNGKSCRLRWINYL 58 788****************9***********************97 PP
2	Myb_DNA-binding	50	6.9e-16	64	109	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++t E+e + +++ lG++ W+ Ia++++ gRt++++k++w+++l Kaladp0418s0009.1.p 64 RGMFSTAEEETIMALHRDLGNK-WSQIAQKLP-GRTDNEIKNYWHTHL 109 788*****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence
MGSEKPKHRR GLWSPEEDEK LRNYILRHGG HGSWSSVPVE IGLQRNGKSC RLRWINYLRP 60 GLKRGMFSTA EEETIMALHR DLGNKWSQIA QKLPGRTDNE IKNYWHTHLK KRIGGTFSSA 120 PKTSQELINS WSTNVSSTFS SPNYSSKPLT QVPSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25560.1	2e-57	MYB family protein