PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0418s0029.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 223aa    MW: 24478.1 Da    PI: 8.0007
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0418s0029.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.31.7e-13119164247
                          SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          ++W++eE++ ++++ k+lG g+W+ I++++   Rt+ q+ s+ qk+
  Kaladp0418s0029.1.p 119 LPWSEEEHKSFLRGLKELGRGNWRGISKEFVRSRTPAQVASHAQKH 164
                          69******************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
METKDGYGGS EAADRLKPFD VEQRTNPEGD RLALTDRSVN LASAFSIGTD ECKESDHQFT  60
DGSIDVLAEG LAGKSRSCGT ADFYGGAAPG DRDGYFSDGS RHDKNVRPSA NHSRRNKGLP  120
WSEEEHKSFL RGLKELGRGN WRGISKEFVR SRTPAQVASH AQKHFIRQSA PPFKKRRNSL  180
FDIPLKESNV ETQEKSVAFQ PVHPPPSPVS PYEPCMIGCL ST*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.13e-29MYB_related family protein