PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0441s0001.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 268aa    MW: 30125.7 Da    PI: 8.1198
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0441s0001.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.59.8e-161461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         rg+WT++Ed++l d++k  G g W+  +++ g++R++k+c++rw++yl
  Kaladp0441s0001.1.p 14 RGAWTAQEDDILRDYIKVNGEGGWRNLPKKAGLNRCGKSCRLRWLNYL 61
                         89********************************************97 PP
2Myb_DNA-binding53.36.2e-1767111147
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          rg+ +++E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ 
  Kaladp0441s0001.1.p  67 RGNISEDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTT 111
                          7899******************.*********.************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MGRSPCCSKE GLNRGAWTAQ EDDILRDYIK VNGEGGWRNL PKKAGLNRCG KSCRLRWLNY  60
LRPDIKRGNI SEDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT TLGKKVGSEV  120
SQRSSSKKGK MSKSKETSKA VPEPDSSTQP LTQPIRTKAF RCTKVHIPAT IHSPREDYNK  180
HEDTKPTHSQ SAQQTSSPDS GEYVVDFSQF LDFGSDEFQG IDTCMGFNGQ FDVPVTKDWM  240
RSDISGLENS SMELESLGFL LDGEGWY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.17e-62MYB family protein