PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0442s0032.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C3H
Protein Properties Length: 358aa    MW: 38976.7 Da    PI: 6.8938
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0442s0032.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH45.41.3e-14264288226
                          -S---SGGGGTS--TTTTT-SS-SS CS
              zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                          ktelC+ +++tG C+yGd C+FaHg
  Kaladp0442s0032.2.p 264 KTELCNKWQETGSCPYGDHCQFAHG 288
                          8***********************8 PP
2zf-CCCH17.85.9e-06301325125
                          --S---SGGGGTS--TTTTT-SS-S CS
              zf-CCCH   1 yktelCrffartGtCkyGdrCkFaH 25 
                          ykte Cr  +++  C+yG rC+F H
  Kaladp0442s0032.2.p 301 YKTEVCRMVLAGDPCPYGHRCHFRH 325
                          9**********55**********88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MENESSNDAH GSYDLISQDS EVFSSSLYSM FTPIQKLSVS PSDSSTTTNS NSSQSPNDSY  60
SNEKTMAAAT TKQALSFIVQ NHQDLVNRHN LCLNHLREAS REAEALRREN ASLRILNREL  120
NDRLALMIQS ALPPRSLSPN FQEVSLMHGF GGLCIGGDSA GGRDGFVESP SPTSVMENNV  180
MEMPMEPVRI ALPKSISVRS DGYLKTNPGS AKSGAAGGGD NRARSSTRVP VADPVSGKQK  240
VYVQGGKKEG EAVELEVYNQ GMVKTELCNK WQETGSCPYG DHCQFAHGIE ELRPVLRHPR  300
YKTEVCRMVL AGDPCPYGHR CHFRHALTEQ EKLMMSALPE AQAGLFASPP ITSNKVK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68200.23e-60C3H family protein