PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0457s0021.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 251aa    MW: 27513.7 Da    PI: 6.6085
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0457s0021.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.00027100122123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          ++C++C + F ++  L  H++ H
  Kaladp0457s0021.1.p 100 FSCNYCRRKFYSSQALGGHQNAH 122
                          89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MDLNMMAVPS NSDSEDESEI NNLVGSSNPS IPDSYFKCHD SIRDSSCLPN LRNSSHLNHE  60
AVSLNLTLHS NASKPIDDGS DPGTELATQP PQVPRIQRLF SCNYCRRKFY SSQALGGHQN  120
AHKRERTMAK RAMKMGVFSH RYASLLSLPI HSHHGFGAMG LEAHALTHQS LGPPPPCLYE  180
NNIHGFEHGG VPFFPEEDVG ELPWPGSFRP HDDSNNLLSE TEKSLPTHFA AMAAPVRSSS  240
SPIPDLTLRL *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24625.14e-33C2H2 family protein