PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0476s0002.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 244aa    MW: 27322.4 Da    PI: 9.9401
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0476s0002.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF50.42.8e-161051243
                         ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
               SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                         +i n+s r+ t+ kR+ g++KK +ELS+LC+++++ ii+s+ 
  Kaladp0476s0002.1.p 10 FIANNSARKATYKKRKRGLIKKVNELSTLCGVDACAIIYSPY 51
                         799*************************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MRRQKFKLAF IANNSARKAT YKKRKRGLIK KVNELSTLCG VDACAIIYSP YETHPVVWPP  60
SAIGVQRVLS QFTRMPEMEQ SKTKVNQETF LRHRIVKTKE QLKKQVKDNR EEEMTEVMFQ  120
CLTGKDMMNL NMTDLNDITW LVDHCLREIN KKCEKLKNSG RDAGTANVVG ADPILEEIKP  180
LILNVNPNFS TGFNPSVAAD GMQSSTWLAG GFVNNNGASS SYNSNQLQGR PGIANDIMQG  240
QPQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.18e-61M-type_MADS family protein