PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0487s0001.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 768aa    MW: 85318.2 Da    PI: 4.7122
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0487s0001.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS340.23.6e-1044287641339
                 GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90 
                          l++lL+ cA+avss+d + a++lL ++++ asp gd +qRla++f+++L+ar+a++++++y + ++++ +    ++ l+a++++ ++ P+
  Kaladp0487s0001.3.p 428 LRTLLVLCAQAVSSDDWRTANQLLRQIRQYASPLGDGTQRLAHCFANGLEARMAGTGNQIYTSRSSRRIT---AADILKAYQVYLHAIPF 514
                          5789*********************************************************887777777...9**************** PP

                 GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfef 178
                           ++    aNq+I +a+++++++Hi+Df+i +G+QWp ++q L+ R++gpp+lRiTg++ p++g   +e++eetg+rL+k+++++gvpfe+
  Kaladp0487s0001.3.p 515 KQIVMSFANQMIFQAASKAQTLHIVDFGILYGFQWPIFIQCLSRREGGPPKLRITGIDLPQPGfrPAERVEETGRRLEKYCKRFGVPFEY 604
                          **************************************************************9*************************** PP

                 GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
                           + +ak+++++++e+L++k++E laVn+ ++l++llde+v+ +s+r++vL+l+++++P+++++   + ++n++ F++rf eal yysalf
  Kaladp0487s0001.3.p 605 YA-IAKKWDTIRIEDLSIKRNEFLAVNCLFRLKNLLDETVDDTSPRNAVLSLIREMNPDIFTHGIANGSYNAPFFVTRFREALFYYSALF 693
                          **.7************************************************************************************** PP

                 GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqakl 339
                          d ++a++pr+++er + E el g+++ nv+aceg er+er et+++W+ r ++aGF+++pl+++++++ + 
  Kaladp0487s0001.3.p 694 DVFDATIPRDNQERLMFEGELYGKDAINVIACEGVERVERPETYKQWQVRCNRAGFRQLPLDKEVMTKLRN 764
                          *****************************************************************998765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 768 aa     Download sequence    
MVMDPYLNGF RGFDDDDDKG VAEFDSFAGN EIHLADGGVG SLDFIDSLIV SPFRGGHGGA  60
AADSTLPFFG MSPQRDSVSG EGGDLSDPVF KYINQMLMEE DMGEKAWMLH DSLALSVAEK  120
SLYDALGEKY PDRPSVLVDS PDGSTSQSFG FSESSSSGSS NANGASYALN DAYQSDHVPP  180
YQPVSLTQNS VPAADVSQPS SFGTGKGFPL RGFDQGVNDF ESNSSSLKGS GSGNSYSSTF  240
NGFDLNGNGL GNAPLSSFQA SEIFNDSEYI MQFQRGVEEA SKFLPKTSNL IIDLDKYQPV  300
VPEPNEVGLL ASAGRSYEDE DKSFVNGFPA AEAEKNVKES SANGSRGNRS RGRKRGEIEM  360
EDERMNKQSA VYVDEEELSV MFDNVLLHCR VKEEAPDSDV CERSPSEKNR NLNETGRDKK  420
QGTDAVDLRT LLVLCAQAVS SDDWRTANQL LRQIRQYASP LGDGTQRLAH CFANGLEARM  480
AGTGNQIYTS RSSRRITAAD ILKAYQVYLH AIPFKQIVMS FANQMIFQAA SKAQTLHIVD  540
FGILYGFQWP IFIQCLSRRE GGPPKLRITG IDLPQPGFRP AERVEETGRR LEKYCKRFGV  600
PFEYYAIAKK WDTIRIEDLS IKRNEFLAVN CLFRLKNLLD ETVDDTSPRN AVLSLIREMN  660
PDIFTHGIAN GSYNAPFFVT RFREALFYYS ALFDVFDATI PRDNQERLMF EGELYGKDAI  720
NVIACEGVER VERPETYKQW QVRCNRAGFR QLPLDKEVMT KLRNKMEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein