PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0489s0004.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 203aa    MW: 22789.3 Da    PI: 7.9571
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0489s0004.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH52.21.1e-163988255
                         HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                         r +h+  E+rRR++iN++f++Lr+l+P++    ++K + a+ L ++++Y+++Lq
  Kaladp0489s0004.1.p 39 RSKHSVTEQRRRSKINERFQRLRDLIPNS----DQKRDTASFLLEVIDYVQYLQ 88
                         899*************************9....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MRSGVKNSNE EEDYGEEDQG GNQSKRDGKG SASKANATRS KHSVTEQRRR SKINERFQRL  60
RDLIPNSDQK RDTASFLLEV IDYVQYLQGE MQKYEGPYQP WSAEPAKLMP WRNSHWRTQS  120
IAPQPLGNGV GAGYAPKFND TSQSTLLGHP HEFSEPDALA DPTEMKEELL GVAFKRRFLC  180
NSKTCVNQTG SELGLQARSC FC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-51bHLH family protein