PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0515s0031.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

FAR1

Protein Properties

Length: 683aa MW: 79379.3 Da PI: 6.9496

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0515s0031.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.6	1e-23	70	160	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHe 88 Y+++A+++GFs+rk++s++s++ g +++r++vC+++g+++++kk+++++ r+r++ r+gC+ak+ ++ke ++w+v+++++ HnHe Kaladp0515s0031.2.p 70 HYSNFARKTGFSIRKARSTESHNLG-VYRRDYVCYRSGFNQPRKKANVEHPRERKSVRCGCDAKMYLTKEIvdgVAQWYVSQFSNIHNHE 158 6******************7777.**************************************998766789*********** PP FAR1 89 la 90 l Kaladp0515s0031.2.p 159 LL 160 96 PP

Sequence ? help Back to Top
Protein Sequence Length: 683 aa Download sequence
MKPSNNIWIR RQQCPCGDWK CYIRYEGDDH TASGSQLVKM ETYSSQSSYA PSFTPYVGQI 60 YKTDTDAFQH YSNFARKTGF SIRKARSTES HNLGVYRRDY VCYRSGFNQP RKKANVEHPR 120 ERKSVRCGCD AKMYLTKEIV DGVAQWYVSQ FSNIHNHELL EDDQVRLLPA YRKIQEADQE 180 RILLLSKAGF PVNRIVKVLE LEKGVQPGQL PFIEKDVRNF VRTCKKTIQE NDTLLTEKRE 240 NDTLEFLEAC KAMAEKDFEF VYDYSTDENG KVENIAWSYG QSVCAYTMFG DVVFFDTAYH 300 SITYGLLLGT WFGMDNHGKP ILLGCVLLQD ETSRSFAWAF QSFHRFMRGR QPQTIVTDMD 360 TAIIHAVANE LPNTKHVICL WHIISKLSSW FTVPLGLHYG DFRSEFEATC FLERIEEFEH 420 QWNHLVTQYE LGSDKHMVLL YTYREYWPFC YINNYFLARM VTKEFLKSMS TFLKKILSSQ 480 SCLQGFFEEI ATAVSIDYQK NDDIQYTYIK TCMPVEEHAR SILTPYAFSV LQNELVLSMQ 540 YEITDMPDGS YHLRHYKGLD KALVIRAEPI QCSCKAFDYS GILCRHCLRI LVLKNCFQLP 600 ETYFLPRWRS DSNFYSVDNQ NQQTGTDERV QAFHTLSTSL LSESIMTRER FNYVRRELSG 660 LLENVRNMPA IIEAAVLGSL AG*

Sequence ? help Back to Top

Protein Sequence Length: 683 aa Download sequence

MKPSNNIWIR RQQCPCGDWK CYIRYEGDDH TASGSQLVKM ETYSSQSSYA PSFTPYVGQI  60
YKTDTDAFQH YSNFARKTGF SIRKARSTES HNLGVYRRDY VCYRSGFNQP RKKANVEHPR  120
ERKSVRCGCD AKMYLTKEIV DGVAQWYVSQ FSNIHNHELL EDDQVRLLPA YRKIQEADQE  180
RILLLSKAGF PVNRIVKVLE LEKGVQPGQL PFIEKDVRNF VRTCKKTIQE NDTLLTEKRE  240
NDTLEFLEAC KAMAEKDFEF VYDYSTDENG KVENIAWSYG QSVCAYTMFG DVVFFDTAYH  300
SITYGLLLGT WFGMDNHGKP ILLGCVLLQD ETSRSFAWAF QSFHRFMRGR QPQTIVTDMD  360
TAIIHAVANE LPNTKHVICL WHIISKLSSW FTVPLGLHYG DFRSEFEATC FLERIEEFEH  420
QWNHLVTQYE LGSDKHMVLL YTYREYWPFC YINNYFLARM VTKEFLKSMS TFLKKILSSQ  480
SCLQGFFEEI ATAVSIDYQK NDDIQYTYIK TCMPVEEHAR SILTPYAFSV LQNELVLSMQ  540
YEITDMPDGS YHLRHYKGLD KALVIRAEPI QCSCKAFDYS GILCRHCLRI LVLKNCFQLP  600
ETYFLPRWRS DSNFYSVDNQ NQQTGTDERV QAFHTLSTSL LSESIMTRER FNYVRRELSG  660
LLENVRNMPA IIEAAVLGSL AG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein